Pseudomonas protegens CHA0, PFLCHA0_c01190

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens CHA0
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c01190
Name
Replicon chromosome
Genomic location 121296 - 122516 (+ strand)

Cross-References

RefSeq YP_007997430.1
GI 501677604
Entrez 15558035
NCBI Locus Tag PFLCHA0_c01190

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.41
Kyte-Doolittle Hydrophobicity Value -0.016
Molecular Weight (kDa) 43496.4
Isoelectric Point (pI) 6.41

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 312 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000437 (549 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c01190

Human Homologs

Ensembl 97, assembly GRCh38.p12
succinyl-CoA:glutarate-CoA transferase [Source:HGNC Symbol;Acc:HGNC:16001]
E-value: 3.0e-96
Percent Identity: 44.9

References

No references are associated with this feature.