Pseudomonas protegens CHA0, PFLCHA0_c01640 (pgaB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c01640
Name
pgaB
Replicon chromosome
Genomic location 191638 - 193635 (+ strand)

Cross-References

RefSeq YP_007997470.1
GI 501677644
EC Number 3.5.1.-
Entrez 15558080
NCBI Locus Tag PFLCHA0_c01640

Product

Feature Type CDS
Coding Frame 1
Product Name
poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB
Synonyms
Evidence for Translation
Charge (pH 7) -2.91
Kyte-Doolittle Hydrophobicity Value -0.306
Molecular Weight (kDa) 74489.7
Isoelectric Point (pI) 6.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 216 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG019701 (82 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c01640
Search term: pgaB

Human Homologs

References

No references are associated with this feature.