Pseudomonas protegens CHA0, PFLCHA0_c05200 (rfaF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c05200
Name
rfaF
Replicon chromosome
Genomic location 600589 - 601653 (+ strand)

Cross-References

RefSeq YP_007997823.1
GI 501677997
EC Number 2.-.-.-
Entrez 15558436
NCBI Locus Tag PFLCHA0_c05200

Product

Feature Type CDS
Coding Frame 1
Product Name
ADP-heptose--LPS heptosyltransferase 2
Synonyms
Evidence for Translation
Charge (pH 7) 3.45
Kyte-Doolittle Hydrophobicity Value -0.197
Molecular Weight (kDa) 39493.2
Isoelectric Point (pI) 8.00

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 310 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004619 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c05200
Search term: rfaF

Human Homologs

References

No references are associated with this feature.