Pseudomonas protegens CHA0, PFLCHA0_c05240

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens CHA0
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c05240
Name
Replicon chromosome
Genomic location 604643 - 605377 (+ strand)

Cross-References

RefSeq YP_007997827.1
GI 501678001
Entrez 15558440
NCBI Locus Tag PFLCHA0_c05240

Product

Feature Type CDS
Coding Frame 1
Product Name
putative lipopolysaccharide core biosynthesis protein
Synonyms
Evidence for Translation
Charge (pH 7) 13.59
Kyte-Doolittle Hydrophobicity Value -0.654
Molecular Weight (kDa) 29021.8
Isoelectric Point (pI) 10.10

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 14 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004615 (550 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c05240

Human Homologs

References

No references are associated with this feature.