Pseudomonas protegens CHA0, PFLCHA0_c13820

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c13820
Name
Replicon chromosome
Genomic location 1540430 - 1541893 (+ strand)

Cross-References

RefSeq YP_007998676.1
GI 501678850
EC Number 3.5.1.4
Entrez 15559298
NCBI Locus Tag PFLCHA0_c13820

Product

Feature Type CDS
Coding Frame 1
Product Name
putative amidase AF
Synonyms
Evidence for Translation
Charge (pH 7) -10.07
Kyte-Doolittle Hydrophobicity Value -0.102
Molecular Weight (kDa) 52924.8
Isoelectric Point (pI) 5.15

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 597 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000201 (909 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c13820

Human Homologs

Ensembl 110, assembly GRCh38.p14
glutaminyl-tRNA amidotransferase subunit QRSL1 [Source:HGNC Symbol;Acc:HGNC:21020]
E-value: 4.4e-29
Percent Identity: 26.8

References

No references are associated with this feature.