Pseudomonas protegens CHA0, PFLCHA0_c19700 (fcl)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas protegens CHA0
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c19700
Name
fcl
Replicon chromosome
Genomic location 2177067 - 2177960 (- strand)

Cross-References

RefSeq YP_007999256.1
GI 501679430
EC Number 1.1.1.271
Entrez 15559886
NCBI Locus Tag PFLCHA0_c19700

Product

Feature Type CDS
Coding Frame 1
Product Name
GDP-L-fucose synthase Fcl
Synonyms
Evidence for Translation
Charge (pH 7) -4.75
Kyte-Doolittle Hydrophobicity Value -0.171
Molecular Weight (kDa) 33047.4
Isoelectric Point (pI) 6.18

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 599 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG022432 (33 members)
Putative Inparalogs 1 predicted inparalogs
hypothetical protein (PFLCHA0_c19750) 44.7% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c19700
Search term: fcl

Human Homologs

Ensembl 97, assembly GRCh38.p12
tissue specific transplantation antigen P35B [Source:HGNC Symbol;Acc:HGNC:12390]
E-value: 1.8e-42
Percent Identity: 34.3
Ensembl 97, assembly GRCh38.p12
tissue specific transplantation antigen P35B [Source:HGNC Symbol;Acc:HGNC:12390]
E-value: 1.8e-42
Percent Identity: 34.3
Ensembl 97, assembly GRCh38.p12
tissue specific transplantation antigen P35B [Source:HGNC Symbol;Acc:HGNC:12390]
E-value: 1.8e-42
Percent Identity: 34.3
Ensembl 97, assembly GRCh38.p12
tissue specific transplantation antigen P35B [Source:HGNC Symbol;Acc:HGNC:12390]
E-value: 1.8e-42
Percent Identity: 34.3

References

No references are associated with this feature.