Pseudomonas protegens CHA0, PFLCHA0_c19710 (gmd)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens CHA0
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c19710
Name
gmd
Replicon chromosome
Genomic location 2178010 - 2179095 (- strand)

Cross-References

RefSeq YP_007999257.1
GI 501679431
EC Number 4.2.1.47
Entrez 15559887
NCBI Locus Tag PFLCHA0_c19710

Product

Feature Type CDS
Coding Frame 1
Product Name
GDP-mannose 4,6-dehydratase Gmd
Synonyms
Evidence for Translation
Charge (pH 7) -5.68
Kyte-Doolittle Hydrophobicity Value -0.454
Molecular Weight (kDa) 41216.4
Isoelectric Point (pI) 6.02

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 627 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004999 (389 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c19710
Search term: gmd

Human Homologs

Ensembl 97, assembly GRCh38.p12
GDP-mannose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:4369]
E-value: 1.2e-125
Percent Identity: 63.2

References

No references are associated with this feature.