Pseudomonas protegens CHA0, PFLCHA0_c19730 (abcA1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens CHA0
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c19730
Name
abcA1
Replicon chromosome
Genomic location 2180945 - 2182288 (- strand)

Cross-References

RefSeq YP_007999259.1
GI 501679433
Entrez 15559889
NCBI Locus Tag PFLCHA0_c19730

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter protein AbcA
Synonyms
Evidence for Translation
Charge (pH 7) -6.17
Kyte-Doolittle Hydrophobicity Value -0.136
Molecular Weight (kDa) 49876.3
Isoelectric Point (pI) 5.73

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001312 (616 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c19730
Search term: abcA1

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35]
E-value: 1.2e-13
Percent Identity: 23.9
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35]
E-value: 1.2e-13
Percent Identity: 23.9
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35]
E-value: 1.2e-13
Percent Identity: 23.9

References

No references are associated with this feature.