Pseudomonas protegens CHA0, PFLCHA0_c32710 (oprM4)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest |
| Locus Tag |
PFLCHA0_c32710
|
| Name |
oprM4
|
| Replicon | chromosome |
| Genomic location | 3659214 - 3660635 (+ strand) |
Cross-References
| RefSeq | YP_008000545.1 |
| GI | 501680719 |
| Entrez | 15561187 |
| NCBI Locus Tag | PFLCHA0_c32710 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
outer membrane protein OprM
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -6.76 |
| Kyte-Doolittle Hydrophobicity Value | -0.284 |
| Molecular Weight (kDa) | 51244.9 |
| Isoelectric Point (pI) | 4.97 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 298 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003062 (545 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c32710
Search term: oprM4
Search term: outer membrane protein OprM
|
Human Homologs
References
No references are associated with this feature.