Pseudomonas protegens CHA0, PFLCHA0_c35460 (ycfQ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c35460
Name
ycfQ
Replicon chromosome
Genomic location 3967720 - 3968319 (- strand)

Cross-References

RefSeq YP_008000818.1
GI 501680992
Entrez 15561462
NCBI Locus Tag PFLCHA0_c35460

Product

Feature Type CDS
Coding Frame 1
Product Name
HTH-type transcriptional regulator YcfQ
Synonyms
Evidence for Translation
Charge (pH 7) -3.13
Kyte-Doolittle Hydrophobicity Value -0.120
Molecular Weight (kDa) 21.7
Isoelectric Point (pI) 5.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 230 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG020514 (27 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c35460
Search term: ycfQ

Human Homologs

References

No references are associated with this feature.