Pseudomonas protegens CHA0, PFLCHA0_c38770 (degU1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens CHA0
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c38770
Name
degU1
Replicon chromosome
Genomic location 4361857 - 4362525 (+ strand)

Cross-References

RefSeq YP_008001147.1
GI 501681321
Entrez 15561793
NCBI Locus Tag PFLCHA0_c38770

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulatory protein DegU
Synonyms
Evidence for Translation
Charge (pH 7) -1.31
Kyte-Doolittle Hydrophobicity Value -0.023
Molecular Weight (kDa) 23.6
Isoelectric Point (pI) 6.29

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 586 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017775 (66 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c38770
Search term: degU1

Human Homologs

References

No references are associated with this feature.