Pseudomonas protegens CHA0, PFLCHA0_c40850 (ddpC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c40850
Name
ddpC
Replicon chromosome
Genomic location 4585859 - 4586758 (+ strand)

Cross-References

RefSeq YP_008001353.1
GI 501681527
Entrez 15562001
NCBI Locus Tag PFLCHA0_c40850

Product

Feature Type CDS
Coding Frame 1
Product Name
putative D,D-dipeptide transport system permease protein DdpC
Synonyms
Evidence for Translation
Charge (pH 7) 10.06
Kyte-Doolittle Hydrophobicity Value 0.519
Molecular Weight (kDa) 32.1
Isoelectric Point (pI) 10.26

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 583 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG020691 (37 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c40850
Search term: ddpC

Human Homologs

References

No references are associated with this feature.