Pseudomonas protegens CHA0, PFLCHA0_c40980

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c40980
Name
Replicon chromosome
Genomic location 4599479 - 4600462 (- strand)

Cross-References

RefSeq YP_008001366.1
GI 501681540
Entrez 15562014
NCBI Locus Tag PFLCHA0_c40980

Product

Feature Type CDS
Coding Frame 1
Product Name
sigma factor regulatory protein, FecR/PupR family
Synonyms
Evidence for Translation
Charge (pH 7) 1.39
Kyte-Doolittle Hydrophobicity Value -0.255
Molecular Weight (kDa) 36007.4
Isoelectric Point (pI) 7.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 143 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001298 (341 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c40980

Human Homologs

References

No references are associated with this feature.