Pseudomonas protegens CHA0, PFLCHA0_c43340 (cysB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c43340
Name
cysB
Replicon chromosome
Genomic location 4910254 - 4911228 (- strand)

Cross-References

RefSeq YP_008001597.1
GI 501681771
Entrez 15562250
NCBI Locus Tag PFLCHA0_c43340

Product

Feature Type CDS
Coding Frame 1
Product Name
HTH-type transcriptional regulator CysB
Synonyms
Evidence for Translation
Charge (pH 7) -0.47
Kyte-Doolittle Hydrophobicity Value 0.019
Molecular Weight (kDa) 36.0
Isoelectric Point (pI) 6.91

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5Z4Z DNA BINDING PROTEIN 01/15/18 Crystal structure of PaCysB NTD domain with space group C2 Pseudomonas aeruginosa 2.053 X-RAY DIFFRACTION 98.9
5Z4Y DNA BINDING PROTEIN 01/18/18 Crystal structure of PaCysB NTD domain with space group P4 Pseudomonas aeruginosa 2.401 X-RAY DIFFRACTION 98.9

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 535 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003639 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c43340
Search term: cysB

Human Homologs

References

No references are associated with this feature.