Pseudomonas protegens CHA0, PFLCHA0_c50290 (cph25)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c50290
Name
cph25
Replicon chromosome
Genomic location 5636079 - 5637602 (+ strand)

Cross-References

RefSeq YP_008002282.1
GI 501682456
Entrez 15562945
NCBI Locus Tag PFLCHA0_c50290

Product

Feature Type CDS
Coding Frame 1
Product Name
phytochrome-like protein Cph2
Synonyms
Evidence for Translation
Charge (pH 7) 4.09
Kyte-Doolittle Hydrophobicity Value -0.042
Molecular Weight (kDa) 55353.2
Isoelectric Point (pI) 8.45

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 456 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015202 (196 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c50290
Search term: cph25

Human Homologs

References

No references are associated with this feature.