Pseudomonas protegens CHA0, PFLCHA0_c56360 (bcd2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens CHA0
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c56360
Name
bcd2
Replicon chromosome
Genomic location 6271632 - 6273428 (- strand)

Cross-References

RefSeq YP_008002868.1
GI 501683042
EC Number 1.3.8.1
Entrez 15563553
NCBI Locus Tag PFLCHA0_c56360

Product

Feature Type CDS
Coding Frame 1
Product Name
acyl-CoA dehydrogenase, short-chain specific
Synonyms
Evidence for Translation
Charge (pH 7) -5.33
Kyte-Doolittle Hydrophobicity Value -0.031
Molecular Weight (kDa) 64.6
Isoelectric Point (pI) 6.54

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 432 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000493 (2559 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c56360
Search term: bcd2

Human Homologs

Ensembl 97, assembly GRCh38.p12
acyl-CoA dehydrogenase very long chain [Source:HGNC Symbol;Acc:HGNC:92]
E-value: 2.7e-29
Percent Identity: 28.6
Ensembl 97, assembly GRCh38.p12
acyl-CoA dehydrogenase very long chain [Source:HGNC Symbol;Acc:HGNC:92]
E-value: 2.7e-29
Percent Identity: 28.6
Ensembl 97, assembly GRCh38.p12
acyl-CoA dehydrogenase very long chain [Source:HGNC Symbol;Acc:HGNC:92]
E-value: 2.7e-29
Percent Identity: 28.6

References

No references are associated with this feature.