Pseudomonas protegens CHA0, PFLCHA0_c56400 (bioD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas protegens CHA0
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c56400
Name
bioD
Replicon chromosome
Genomic location 6277539 - 6278219 (- strand)

Cross-References

RefSeq YP_008002872.1
GI 501683046
EC Number 6.3.3.3
Entrez 15563557
NCBI Locus Tag PFLCHA0_c56400

Product

Feature Type CDS
Coding Frame 1
Product Name
dethiobiotin synthetase BioD
Synonyms
Evidence for Translation
Charge (pH 7) -4.89
Kyte-Doolittle Hydrophobicity Value 0.373
Molecular Weight (kDa) 23.3
Isoelectric Point (pI) 5.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 409 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000491 (555 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c56400
Search term: bioD

Human Homologs

References

No references are associated with this feature.