Pseudomonas protegens CHA0, PFLCHA0_c57290

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c57290
Name
Replicon chromosome
Genomic location 6375762 - 6376499 (- strand)

Cross-References

RefSeq YP_008002961.1
GI 501683135
Entrez 15563646
NCBI Locus Tag PFLCHA0_c57290

Product

Feature Type CDS
Coding Frame 1
Product Name
amino acid ABC transporter, periplasmic amino acid-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.44
Kyte-Doolittle Hydrophobicity Value -0.193
Molecular Weight (kDa) 27.8
Isoelectric Point (pI) 7.88

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 74 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG014296 (480 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c57290

Human Homologs

References

No references are associated with this feature.