Pseudomonas protegens CHA0, PFLCHA0_c61190 (cfiB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c61190
Name
cfiB
Replicon chromosome
Genomic location 6785339 - 6786754 (- strand)

Cross-References

RefSeq YP_008003351.1
GI 501683525
EC Number 6.4.1.7
Entrez 15564036
NCBI Locus Tag PFLCHA0_c61190

Product

Feature Type CDS
Coding Frame 1
Product Name
2-oxoglutarate carboxylase small subunit CfiB
Synonyms
Evidence for Translation
Charge (pH 7) -2.54
Kyte-Doolittle Hydrophobicity Value -0.193
Molecular Weight (kDa) 51.9
Isoelectric Point (pI) 6.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 631 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004986 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c61190
Search term: cfiB

Human Homologs

Ensembl 110, assembly GRCh38.p14
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 6.0e-124
Percent Identity: 49.2
Ensembl 110, assembly GRCh38.p14
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 6.0e-124
Percent Identity: 49.2
Ensembl 110, assembly GRCh38.p14
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 6.0e-124
Percent Identity: 49.2
Ensembl 110, assembly GRCh38.p14
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 6.0e-124
Percent Identity: 49.2
Ensembl 110, assembly GRCh38.p14
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 6.0e-124
Percent Identity: 49.2
Ensembl 110, assembly GRCh38.p14
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 6.0e-124
Percent Identity: 49.2
Ensembl 110, assembly GRCh38.p14
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 6.0e-124
Percent Identity: 49.2
Ensembl 110, assembly GRCh38.p14
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 6.0e-124
Percent Identity: 49.2

References

No references are associated with this feature.