Pseudomonas protegens CHA0, PFLCHA0_c61300 (pdxY)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c61300
Name
pdxY
Replicon chromosome
Genomic location 6801026 - 6801898 (- strand)

Cross-References

RefSeq YP_008003362.1
GI 501683536
EC Number 2.7.1.35
Entrez 15564047
NCBI Locus Tag PFLCHA0_c61300

Product

Feature Type CDS
Coding Frame 1
Product Name
pyridoxamine kinase PdxY
Synonyms
Evidence for Translation
Charge (pH 7) -4.05
Kyte-Doolittle Hydrophobicity Value 0.208
Molecular Weight (kDa) 31235.8
Isoelectric Point (pI) 6.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 128 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005054 (496 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c61300
Search term: pdxY

Human Homologs

Ensembl 110, assembly GRCh38.p14
pyridoxal kinase [Source:HGNC Symbol;Acc:HGNC:8819]
E-value: 4.7e-34
Percent Identity: 31.1

References

No references are associated with this feature.