Pseudomonas poae RE_1-1-14, H045_00825

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_00825
Name
Replicon chromosome
Genomic location 176937 - 177713 (- strand)

Cross-References

RefSeq YP_007395737.1
GI 447915169
Entrez 14501969
INSDC AGE24241.1
NCBI Locus Tag H045_00825
UniParc UPI0002AF4E2B
UniProtKB Acc M4JW95
UniProtKB ID M4JW95_9PSED
UniRef100 UniRef100_M4JW95
UniRef50 UniRef50_G8Q8G7
UniRef90 UniRef90_M4JW95

Product

Feature Type CDS
Coding Frame 1
Product Name
putative deoxyribonuclease
Synonyms
Evidence for Translation
Charge (pH 7) -1.17
Kyte-Doolittle Hydrophobicity Value -0.181
Molecular Weight (kDa) 29291.4
Isoelectric Point (pI) 6.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 631 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002102 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_00825

Human Homologs

Ensembl 110, assembly GRCh38.p14
TatD DNase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27010]
E-value: 2.4e-21
Percent Identity: 28.7

References

No references are associated with this feature.