Pseudomonas poae RE_1-1-14, H045_03560

Gene Feature Overview

Strain	Pseudomonas poae RE*1-1-14 GCF_000336465.1|latest
Locus Tag	H045_03560
Name
Replicon	chromosome
Genomic location	770661 - 773507 (- strand)

Cross-References

RefSeq	YP_007396284.1
GI	447915716
Entrez	14502516
INSDC	AGE24788.1
NCBI Locus Tag	H045_03560
UniParc	UPI0002AF4F01
UniProtKB Acc	M4JW55
UniProtKB ID	M4JW55_9PSED
UniRef100	UniRef100_M4JW55
UniRef50	UniRef50_Q8ZRV8
UniRef90	UniRef90_Q87XS2

Product

Feature Type	CDS
Coding Frame	1
Product Name	ATP-dependent helicase HepA
Synonyms
Evidence for Translation
Charge (pH 7)	-48.32
Kyte-Doolittle Hydrophobicity Value	-0.316
Molecular Weight (kDa)	106774.5
Isoelectric Point (pI)	4.73

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 317 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002310 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: H045_03560 Search term: ATP-dependent helicase HepA

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000457355 chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701] E-value: 1.7e-08 Percent Identity: 22.0
Ensembl 110, assembly GRCh38.p14	ENSP00000457466 chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701] E-value: 1.7e-08 Percent Identity: 22.0
Ensembl 110, assembly GRCh38.p14	ENSP00000396345 chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701] E-value: 1.7e-08 Percent Identity: 22.0
Ensembl 110, assembly GRCh38.p14	ENSP00000455307 chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701] E-value: 1.7e-08 Percent Identity: 22.0
Ensembl 110, assembly GRCh38.p14	ENSP00000381522 chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701] E-value: 1.7e-08 Percent Identity: 22.0

References