Pseudomonas poae RE_1-1-14, H045_04895

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_04895
Name
Replicon chromosome
Genomic location 1062553 - 1063236 (- strand)

Cross-References

RefSeq YP_007396551.1
GI 447915983
Entrez 14502783
INSDC AGE25055.1
NCBI Locus Tag H045_04895
UniParc UPI0002A788F6
UniProtKB Acc M4K339
UniProtKB ID M4K339_9PSED
UniRef100 UniRef100_M4K339
UniRef50 UniRef50_A0A0B7DDC9
UniRef90 UniRef90_A0A0B7DDC9

Product

Feature Type CDS
Coding Frame 1
Product Name
putative ABC transportsystem, ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -6.34
Kyte-Doolittle Hydrophobicity Value -0.121
Molecular Weight (kDa) 24.5
Isoelectric Point (pI) 5.35

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002712 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_04895

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 6.5e-15
Percent Identity: 33.2
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 6.5e-15
Percent Identity: 33.2
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 6.5e-15
Percent Identity: 33.2

References

No references are associated with this feature.