Pseudomonas poae RE_1-1-14, H045_08400

Gene Feature Overview

Strain	Pseudomonas poae RE*1-1-14 GCF_000336465.1|latest
Locus Tag	H045_08400
Name
Replicon	chromosome
Genomic location	1868064 - 1869761 (- strand)

Cross-References

RefSeq	YP_007397246.1
GI	447916678
Entrez	14503478
INSDC	AGE25750.1
NCBI Locus Tag	H045_08400
UniParc	UPI0002AF4A2C
UniProtKB Acc	M4K550
UniProtKB ID	M4K550_9PSED
UniRef100	UniRef100_M4K550
UniRef50	UniRef50_Q39CF5
UniRef90	UniRef90_M4K550

Product

Feature Type	CDS
Coding Frame	1
Product Name	ABC transporter, 2 ATP-binding domain protein
Synonyms
Evidence for Translation
Charge (pH 7)	6.16
Kyte-Doolittle Hydrophobicity Value	-0.057
Molecular Weight (kDa)	61556.0
Isoelectric Point (pI)	8.05

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 667 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001345 (417 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: H045_08400 Search term: ABC transporter, 2 ATP-binding domain protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000411471 ATP binding cassette subfamily F member 3 [Source:HGNC Symbol;Acc:HGNC:72] E-value: 3.1e-34 Percent Identity: 28.7
Ensembl 110, assembly GRCh38.p14	ENSP00000292808 ATP binding cassette subfamily F member 3 [Source:HGNC Symbol;Acc:HGNC:72] E-value: 3.1e-34 Percent Identity: 28.7

References