Pseudomonas poae RE_1-1-14, H045_10460

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_10460
Name
Replicon chromosome
Genomic location 2422626 - 2423534 (- strand)

Cross-References

RefSeq YP_007397653.1
GI 447917085
Entrez 14503885
INSDC AGE26157.1
NCBI Locus Tag H045_10460
UniParc UPI0002AF4BDB
UniProtKB Acc M4K3I3
UniProtKB ID M4K3I3_9PSED
UniRef100 UniRef100_M4K3I3
UniRef50 UniRef50_Q9I0Z0
UniRef90 UniRef90_C3JXT4

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 1.57
Kyte-Doolittle Hydrophobicity Value 0.054
Molecular Weight (kDa) 32981.8
Isoelectric Point (pI) 7.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 229 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016442 (134 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_10460

Human Homologs

References

No references are associated with this feature.