Pseudomonas poae RE_1-1-14, H045_10555

Gene Feature Overview

Strain	Pseudomonas poae RE*1-1-14 GCF_000336465.1|latest
Locus Tag	H045_10555
Name
Replicon	chromosome
Genomic location	2443817 - 2444914 (- strand)

Cross-References

RefSeq	YP_007397672.1
GI	447917104
Entrez	14503904
INSDC	AGE26176.1
NCBI Locus Tag	H045_10555
UniParc	UPI0002AF46D6
UniProtKB Acc	M4K0Y9
UniProtKB ID	M4K0Y9_9PSED
UniRef100	UniRef100_M4K0Y9
UniRef50	UniRef50_D7HXS5
UniRef90	UniRef90_C3JXX0

Product

Feature Type	CDS
Coding Frame	1
Product Name	putative ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	-7.38
Kyte-Doolittle Hydrophobicity Value	-0.090
Molecular Weight (kDa)	40593.3
Isoelectric Point (pI)	5.78

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG015627 (151 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: H045_10555 Search term: putative ABC transporter ATP-binding protein

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000284425 ATP binding cassette subfamily A member 6 [Source:HGNC Symbol;Acc:HGNC:36] E-value: 3.7e-20 Percent Identity: 30.8

References