Pseudomonas poae RE_1-1-14, H045_12590 (mnmC)

Gene Feature Overview

Strain	Pseudomonas poae RE*1-1-14 GCF_000336465.1|latest
Locus Tag	H045_12590
Name	mnmC
Replicon	chromosome
Genomic location	2912351 - 2914330 (+ strand)

Cross-References

RefSeq	YP_007398079.1
GI	447917511
Entrez	14504311
INSDC	AGE26583.1
NCBI Locus Tag	H045_12590
UniParc	UPI0002AF5089
UniProtKB Acc	M4K0D3
UniProtKB ID	M4K0D3_9PSED
UniRef100	UniRef100_M4K0D3
UniRef50	UniRef50_Q48LF6
UniRef90	UniRef90_M4K0D3

Product

Feature Type	CDS
Coding Frame	1
Product Name	bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase
Synonyms
Evidence for Translation
Charge (pH 7)	-5.92
Kyte-Doolittle Hydrophobicity Value	-0.057
Molecular Weight (kDa)	71789.0
Isoelectric Point (pI)	6.51

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 245 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002184 (530 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: H045_12590 Search term: mnmC Search term: bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase

Human Homologs

References