Pseudomonas poae RE_1-1-14, H045_13965

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_13965
Name
Replicon chromosome
Genomic location 3235644 - 3236234 (- strand)

Cross-References

RefSeq YP_007398354.1
GI 447917786
Entrez 14504586
INSDC AGE26858.1
NCBI Locus Tag H045_13965
UniParc UPI0002A789FE
UniProtKB Acc M4K184
UniProtKB ID M4K184_9PSED
UniRef100 UniRef100_M4K184
UniRef50 UniRef50_A4VL64
UniRef90 UniRef90_I2BLX6

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA polymerase sigma factor SigX
Synonyms
Evidence for Translation
Charge (pH 7) -1.37
Kyte-Doolittle Hydrophobicity Value -0.705
Molecular Weight (kDa) 23.3
Isoelectric Point (pI) 6.30

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 470 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003619 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_13965

Human Homologs

References

No references are associated with this feature.