Pseudomonas poae RE_1-1-14, H045_15210

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_15210
Name
Replicon chromosome
Genomic location 3480240 - 3480836 (+ strand)

Cross-References

RefSeq YP_007398603.1
GI 447918035
Entrez 14504835
INSDC AGE27107.1
NCBI Locus Tag H045_15210
UniParc UPI0002A7977A
UniProtKB Acc M4K682
UniProtKB ID M4K682_9PSED
UniRef100 UniRef100_M4K682
UniRef50 UniRef50_P09223
UniRef90 UniRef90_P09223

Product

Feature Type CDS
Coding Frame 1
Product Name
superoxide dismutase
Synonyms
Evidence for Translation
Charge (pH 7) -6.15
Kyte-Doolittle Hydrophobicity Value -0.279
Molecular Weight (kDa) 22.0
Isoelectric Point (pI) 5.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
1DT0 OXIDOREDUCTASE 01/10/00 CLONING, SEQUENCE, AND CRYSTALLOGRAPHIC STRUCTURE OF RECOMBINANT IRON SUPEROXIDE DISMUTASE FROM PSEUDOMONAS OVALIS Pseudomonas putida 2.1 X-RAY DIFFRACTION 94.9
3SDP OXIDOREDUCTASE (SUPEROXIDE ACCEPTOR) 05/06/91 THE 2.1 ANGSTROMS RESOLUTION STRUCTURE OF IRON SUPEROXIDE DISMUTASE FROM PSEUDOMONAS OVALIS Pseudomonas putida 2.1 X-RAY DIFFRACTION 92.9

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 530 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003959 (531 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_15210

Human Homologs

Ensembl 110, assembly GRCh38.p14
superoxide dismutase 2 [Source:HGNC Symbol;Acc:HGNC:11180]
E-value: 4.1e-42
Percent Identity: 46.9
Ensembl 110, assembly GRCh38.p14
superoxide dismutase 2 [Source:HGNC Symbol;Acc:HGNC:11180]
E-value: 4.1e-42
Percent Identity: 46.9

References

No references are associated with this feature.