Pseudomonas poae RE_1-1-14, H045_18410

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_18410
Name
Replicon chromosome
Genomic location 4207728 - 4209497 (- strand)

Cross-References

RefSeq YP_007399240.1
GI 447918672
Entrez 14505472
INSDC AGE27744.1
NCBI Locus Tag H045_18410
UniParc UPI0002AF4E37
UniProtKB Acc M4K425
UniProtKB ID M4K425_9PSED
UniRef100 UniRef100_M4K425
UniRef50 UniRef50_B3PNQ8
UniRef90 UniRef90_C3K356

Product

Feature Type CDS
Coding Frame 1
Product Name
acyl-CoA dehydrogenase family protein
Synonyms
Evidence for Translation
Charge (pH 7) -6.30
Kyte-Doolittle Hydrophobicity Value -0.045
Molecular Weight (kDa) 63145.5
Isoelectric Point (pI) 6.47

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 430 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000493 (2559 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_18410

Human Homologs

Ensembl 97, assembly GRCh38.p12
acyl-CoA dehydrogenase very long chain [Source:HGNC Symbol;Acc:HGNC:92]
E-value: 5.1e-28
Percent Identity: 30.0
Ensembl 97, assembly GRCh38.p12
acyl-CoA dehydrogenase very long chain [Source:HGNC Symbol;Acc:HGNC:92]
E-value: 5.1e-28
Percent Identity: 30.0
Ensembl 97, assembly GRCh38.p12
acyl-CoA dehydrogenase very long chain [Source:HGNC Symbol;Acc:HGNC:92]
E-value: 5.1e-28
Percent Identity: 30.0

References

No references are associated with this feature.