Pseudomonas poae RE_1-1-14, H045_20350
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest |
| Locus Tag |
H045_20350
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4617111 - 4617815 (- strand) |
Cross-References
| RefSeq | YP_007399628.1 |
| GI | 447919060 |
| Entrez | 14505860 |
| INSDC | AGE28132.1 |
| NCBI Locus Tag | H045_20350 |
| UniParc | UPI0002A79944 |
| UniProtKB Acc | M4K8Z1 |
| UniProtKB ID | M4K8Z1_9PSED |
| UniRef100 | UniRef100_M4K8Z1 |
| UniRef50 | UniRef50_V9R4G7 |
| UniRef90 | UniRef90_M4K8Z1 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
putative ABC transporter ATP-binding protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 3.98 |
| Kyte-Doolittle Hydrophobicity Value | 0.085 |
| Molecular Weight (kDa) | 24.7 |
| Isoelectric Point (pI) | 8.30 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000072 (425 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: H045_20350
Search term: putative ABC transporter ATP-binding protein
|
Human Homologs
|
Ensembl
107, assembly
GRCh38.p13
|
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value:
2.1e-13
Percent Identity:
34.2
|
|
Ensembl
107, assembly
GRCh38.p13
|
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value:
2.1e-13
Percent Identity:
34.2
|
|
Ensembl
107, assembly
GRCh38.p13
|
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value:
2.1e-13
Percent Identity:
34.2
|
|
Ensembl
107, assembly
GRCh38.p13
|
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value:
2.1e-13
Percent Identity:
34.2
|
References
No references are associated with this feature.