Pseudomonas poae RE_1-1-14, H045_20350

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_20350
Name
Replicon chromosome
Genomic location 4617111 - 4617815 (- strand)

Cross-References

RefSeq YP_007399628.1
GI 447919060
Entrez 14505860
INSDC AGE28132.1
NCBI Locus Tag H045_20350
UniParc UPI0002A79944
UniProtKB Acc M4K8Z1
UniProtKB ID M4K8Z1_9PSED
UniRef100 UniRef100_M4K8Z1
UniRef50 UniRef50_V9R4G7
UniRef90 UniRef90_M4K8Z1

Product

Feature Type CDS
Coding Frame 1
Product Name
putative ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) 3.98
Kyte-Doolittle Hydrophobicity Value 0.085
Molecular Weight (kDa) 24.7
Isoelectric Point (pI) 8.30

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000072 (425 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_20350

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 1.8e-13
Percent Identity: 34.2
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 1.8e-13
Percent Identity: 34.2
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 1.8e-13
Percent Identity: 34.2
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 1.8e-13
Percent Identity: 34.2
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 1.8e-13
Percent Identity: 34.2

References

No references are associated with this feature.