Pseudomonas poae RE_1-1-14, H045_20385
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest |
| Locus Tag |
H045_20385
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4628300 - 4628809 (- strand) |
Cross-References
| RefSeq | YP_007399635.1 |
| GI | 447919067 |
| Entrez | 14505867 |
| NCBI Locus Tag | H045_20385 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
type VI secretion lipoprotein TssJ1
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -0.08 |
| Kyte-Doolittle Hydrophobicity Value | -0.031 |
| Molecular Weight (kDa) | 18200.4 |
| Isoelectric Point (pI) | 6.96 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 71 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000079 (838 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: H045_20385
Search term: type VI secretion lipoprotein TssJ1
|
Human Homologs
References
No references are associated with this feature.