Pseudomonas poae RE_1-1-14, H045_20400

Gene Feature Overview

Strain	Pseudomonas poae RE*1-1-14 GCF_000336465.1|latest
Locus Tag	H045_20400
Name
Replicon	chromosome
Genomic location	4631637 - 4632143 (+ strand)

Cross-References

RefSeq	YP_007399638.1
GI	447919070
Entrez	14505870
INSDC	AGE28142.1
NCBI Locus Tag	H045_20400
UniParc	UPI0002AF4C9A
UniProtKB Acc	M4K902
UniProtKB ID	M4K902_9PSED
UniRef100	UniRef100_M4K902
UniRef50	UniRef50_Q4K3N8
UniRef90	UniRef90_Q4K3N8

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-3.76
Kyte-Doolittle Hydrophobicity Value	-0.213
Molecular Weight (kDa)	18361.9
Isoelectric Point (pI)	4.85

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
5N8N	STRUCTURAL PROTEIN	02/23/17	Contracted sheath of a Pseudomonas aeruginosa type six secretion system consisting of TssB1 and TssC1	Pseudomonas aeruginosa	3.28	ELECTRON MICROSCOPY	93.1
4UQZ	PROTEIN TRANSPORT	06/25/14	Coevolution of the ATPase ClpV, the TssB-TssC Sheath and the Accessory HsiE Protein Distinguishes Two Type VI Secretion Classes	PSEUDOMONAS AERUGINOSA PAO1	1.599	X-RAY DIFFRACTION	92.1

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 107 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000082 (1260 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: H045_20400

Human Homologs

References