Strain |
Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest |
Locus Tag |
H045_20405
|
Name |
|
Replicon | chromosome |
Genomic location | 4632146 - 4633642 (+ strand) |
RefSeq | YP_007399639.1 |
GI | 447919071 |
Entrez | 14505871 |
INSDC | AGE28143.1 |
NCBI Locus Tag | H045_20405 |
UniParc | UPI0002A78920 |
UniProtKB Acc | M4K4V2 |
UniProtKB ID | M4K4V2_9PSED |
UniRef100 | UniRef100_M4K4V2 |
UniRef50 | UniRef50_Q4K3N7 |
UniRef90 | UniRef90_Q4K3N7 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
type VI secretion protein TssC1
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -14.27 |
Kyte-Doolittle Hydrophobicity Value | -0.437 |
Molecular Weight (kDa) | 55.7 |
Isoelectric Point (pI) | 5.10 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
5N8N | STRUCTURAL PROTEIN | 02/23/17 | Contracted sheath of a Pseudomonas aeruginosa type six secretion system consisting of TssB1 and TssC1 | Pseudomonas aeruginosa | 3.28 | ELECTRON MICROSCOPY | 93.9 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 111 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000083 (1225 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: H045_20405
Search term: type VI secretion protein TssC1
|