Pseudomonas poae RE_1-1-14, H045_21050 (gyrB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_21050
Name
gyrB
Replicon chromosome
Genomic location 4772709 - 4775126 (+ strand)

Cross-References

RefSeq YP_007399768.1
GI 447919200
Entrez 14506000
INSDC AGE28272.1
NCBI Locus Tag H045_21050
UniParc UPI0002A79997
UniProtKB Acc M4K9C9
UniProtKB ID M4K9C9_9PSED
UniRef100 UniRef100_M4K9C9
UniRef50 UniRef50_P13364
UniRef90 UniRef90_Q4KKS7

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA gyrase subunit B
Synonyms
Evidence for Translation
Charge (pH 7) -16.00
Kyte-Doolittle Hydrophobicity Value -0.414
Molecular Weight (kDa) 90.5
Isoelectric Point (pI) 5.67

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 633 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000004 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_21050
Search term: gyrB

Human Homologs

Ensembl 110, assembly GRCh38.p14
DNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]
E-value: 2.1e-31
Percent Identity: 25.0

References

No references are associated with this feature.