Pseudomonas denitrificans ATCC 13867, H681_00280

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest
Locus Tag
H681_00280
Name
Replicon chromosome
Genomic location 67099 - 68478 (+ strand)

Cross-References

RefSeq YP_007655478.1
GI 472323232
Entrez 14994196
INSDC AGI21938.1
NCBI Locus Tag H681_00280
UniParc UPI0002C4F445
UniProtKB Acc M4WPL4
UniProtKB ID M4WPL4_PSEDE
UniRef100 UniRef100_M4WPL4
UniRef50 UniRef50_E1V7V7
UniRef90 UniRef90_A6V9K0

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -6.61
Kyte-Doolittle Hydrophobicity Value -0.016
Molecular Weight (kDa) 49254.7
Isoelectric Point (pI) 6.38

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5KQU TRANSFERASE 07/06/16 Directed Evolution of Transaminases By Ancestral Reconstruction. Using Old Proteins for New Chemistries Pseudomonas 2.62 X-RAY DIFFRACTION 90.2
5KQT TRANSFERASE 07/06/16 Directed Evolution of Transaminases By Ancestral Reconstruction. Using Old Proteins for New Chemistries Pseudomonas sp. AAC 1.99 X-RAY DIFFRACTION 95.6

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 638 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016762 (44 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H681_00280

Human Homologs

Ensembl 110, assembly GRCh38.p14
ornithine aminotransferase [Source:HGNC Symbol;Acc:HGNC:8091]
E-value: 2.9e-30
Percent Identity: 27.2

References

No references are associated with this feature.