Pseudomonas denitrificans ATCC 13867, H681_02115
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest |
| Locus Tag |
H681_02115
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 467657 - 469033 (- strand) |
Cross-References
| RefSeq | YP_007655845.1 |
| GI | 472323599 |
| Entrez | 14994563 |
| NCBI Locus Tag | H681_02115 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ATP-dependent RNA helicase DbpA
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 5.42 |
| Kyte-Doolittle Hydrophobicity Value | -0.057 |
| Molecular Weight (kDa) | 49768.7 |
| Isoelectric Point (pI) | 8.23 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 617 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000446 (534 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: H681_02115
Search term: ATP-dependent RNA helicase DbpA
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
eukaryotic translation initiation factor 4A3 [Source:HGNC Symbol;Acc:HGNC:18683]
E-value:
5.4e-61
Percent Identity:
36.0
|
|
Ensembl
110, assembly
GRCh38.p14
|
eukaryotic translation initiation factor 4A3 [Source:HGNC Symbol;Acc:HGNC:18683]
E-value:
5.4e-61
Percent Identity:
36.0
|
|
Ensembl
110, assembly
GRCh38.p14
|
eukaryotic translation initiation factor 4A3 [Source:HGNC Symbol;Acc:HGNC:18683]
E-value:
5.4e-61
Percent Identity:
36.0
|
|
Ensembl
110, assembly
GRCh38.p14
|
eukaryotic translation initiation factor 4A3 [Source:HGNC Symbol;Acc:HGNC:18683]
E-value:
5.4e-61
Percent Identity:
36.0
|
References
No references are associated with this feature.