Pseudomonas denitrificans ATCC 13867, H681_03555

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest
Locus Tag
H681_03555
Name
Replicon chromosome
Genomic location 767793 - 768359 (+ strand)

Cross-References

RefSeq YP_007656133.1
GI 472323887
Entrez 14994851
INSDC AGI22593.1
NCBI Locus Tag H681_03555
UniParc UPI0002C4F321
UniProtKB Acc M4WRA6
UniProtKB ID M4WRA6_PSEDE
UniRef100 UniRef100_M4WRA6
UniRef50 UniRef50_A5EVG2
UniRef90 UniRef90_M4WRA6

Product

Feature Type CDS
Coding Frame 1
Product Name
ribosomal large subunit pseudouridine synthase E
Synonyms
Evidence for Translation
Charge (pH 7) 3.21
Kyte-Doolittle Hydrophobicity Value -0.555
Molecular Weight (kDa) 21319.3
Isoelectric Point (pI) 9.71

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 579 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001711 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H681_03555

Human Homologs

References

No references are associated with this feature.