Pseudomonas denitrificans ATCC 13867, H681_04060

Gene Feature Overview

Strain	Pseudomonas denitrificans ATCC 13867 GCF_000349845.1|latest
Locus Tag	H681_04060
Name
Replicon	chromosome
Genomic location	879175 - 880527 (+ strand)

Cross-References

RefSeq	YP_007656234.1
GI	472323988
Entrez	14994952
INSDC	AGI22694.1
NCBI Locus Tag	H681_04060
UniParc	UPI0002C4F720
UniProtKB Acc	M4WSI3
UniProtKB ID	M4WSI3_PSEDE
UniRef100	UniRef100_M4WSI3
UniRef50	UniRef50_P37773
UniRef90	UniRef90_A0A024HP64

Product

Feature Type	CDS
Coding Frame	1
Product Name	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
Synonyms
Evidence for Translation
Charge (pH 7)	-8.34
Kyte-Doolittle Hydrophobicity Value	0.066
Molecular Weight (kDa)	47921.3
Isoelectric Point (pI)	6.25

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 578 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001663 (497 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: H681_04060 Search term: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase

Human Homologs

References