Pseudomonas denitrificans ATCC 13867, H681_08140

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest
Locus Tag
H681_08140
Name
Replicon chromosome
Genomic location 1771325 - 1772284 (- strand)

Cross-References

RefSeq YP_007657044.1
GI 472324798
Entrez 14995762
INSDC AGI23504.1
NCBI Locus Tag H681_08140
UniParc UPI0002C4F825
UniProtKB Acc M4WUP6
UniProtKB ID M4WUP6_PSEDE
UniRef100 UniRef100_M4WUP6
UniRef50 UniRef50_Q9I3S3
UniRef90 UniRef90_Q4KGD3

Product

Feature Type CDS
Coding Frame 1
Product Name
guanidinobutyrase
Synonyms
Evidence for Translation
Charge (pH 7) -12.50
Kyte-Doolittle Hydrophobicity Value -0.077
Molecular Weight (kDa) 34.9
Isoelectric Point (pI) 4.98

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3NIO HYDROLASE 06/16/10 Crystal structure of Pseudomonas aeruginosa guanidinobutyrase Pseudomonas aeruginosa 2 X-RAY DIFFRACTION 94.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 433 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001341 (475 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H681_08140
Search term: guanidinobutyrase

Human Homologs

Ensembl 110, assembly GRCh38.p14
agmatinase [Source:HGNC Symbol;Acc:HGNC:18407]
E-value: 1.7e-114
Percent Identity: 62.2

References

No references are associated with this feature.