Pseudomonas denitrificans ATCC 13867, H681_13055

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest
Locus Tag
H681_13055
Name
Replicon chromosome
Genomic location 2946996 - 2947478 (- strand)

Cross-References

RefSeq YP_007658021.1
GI 472325775
Entrez 14996739
INSDC AGI24481.1
NCBI Locus Tag H681_13055
UniParc UPI0002C4E1A9
UniProtKB Acc M4WZ02
UniProtKB ID M4WZ02_PSEDE
UniRef100 UniRef100_M4WZ02
UniRef50 UniRef50_Q4K9A6
UniRef90 UniRef90_M4WZ02

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA polymerase sigma factor
Synonyms
Evidence for Translation
Charge (pH 7) 4.84
Kyte-Doolittle Hydrophobicity Value -0.665
Molecular Weight (kDa) 18850.4
Isoelectric Point (pI) 8.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 355 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003140 (459 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H681_13055

Human Homologs

References

No references are associated with this feature.