Pseudomonas denitrificans ATCC 13867, H681_13630
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest |
| Locus Tag |
H681_13630
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 3076445 - 3077725 (- strand) |
Cross-References
| RefSeq | YP_007658136.1 |
| GI | 472325890 |
| EC Number | 6.1.1.11 |
| Entrez | 14996854 |
| NCBI Locus Tag | H681_13630 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
seryl-tRNA ligase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -12.92 |
| Kyte-Doolittle Hydrophobicity Value | -0.389 |
| Molecular Weight (kDa) | 47495.4 |
| Isoelectric Point (pI) | 5.01 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 653 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002939 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: H681_13630
Search term: seryl-tRNA ligase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
seryl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:10537]
E-value:
9.2e-55
Percent Identity:
36.3
|
References
No references are associated with this feature.