Pseudomonas denitrificans ATCC 13867, H681_15645
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest |
| Locus Tag |
H681_15645
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 3539392 - 3541080 (- strand) |
Cross-References
| RefSeq | YP_007658537.1 |
| GI | 472326291 |
| Entrez | 14997255 |
| NCBI Locus Tag | H681_15645 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ATP-dependent RNA helicase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 7.09 |
| Kyte-Doolittle Hydrophobicity Value | -0.240 |
| Molecular Weight (kDa) | 61655.4 |
| Isoelectric Point (pI) | 9.09 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 635 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002728 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: H681_15645
Search term: ATP-dependent RNA helicase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 23 [Source:HGNC Symbol;Acc:HGNC:17347]
E-value:
1.3e-56
Percent Identity:
39.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 23 [Source:HGNC Symbol;Acc:HGNC:17347]
E-value:
1.3e-56
Percent Identity:
39.3
|
References
No references are associated with this feature.