Pseudomonas denitrificans ATCC 13867, H681_17305 (mnmC)

Gene Feature Overview

Strain	Pseudomonas denitrificans ATCC 13867 GCF_000349845.1|latest
Locus Tag	H681_17305
Name	mnmC
Replicon	chromosome
Genomic location	3910678 - 3912657 (+ strand)

Cross-References

RefSeq	YP_007658869.1
GI	472326623
Entrez	14997587
INSDC	AGI25329.1
NCBI Locus Tag	H681_17305
UniParc	UPI0002C4DCDC
UniProtKB Acc	M4WZS9
UniProtKB ID	M4WZS9_PSEDE
UniRef100	UniRef100_M4WZS9
UniRef50	UniRef50_Q9HYF0
UniRef90	UniRef90_M4WZS9

Product

Feature Type	CDS
Coding Frame	1
Product Name	bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase
Synonyms
Evidence for Translation
Charge (pH 7)	-6.15
Kyte-Doolittle Hydrophobicity Value	-0.105
Molecular Weight (kDa)	71322.2
Isoelectric Point (pI)	6.37

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 241 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002184 (530 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: H681_17305 Search term: mnmC Search term: bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase

Human Homologs

References