Pseudomonas denitrificans ATCC 13867, H681_22795

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest
Locus Tag
H681_22795
Name
Replicon chromosome
Genomic location 5109981 - 5111999 (+ strand)

Cross-References

RefSeq YP_007659966.1
GI 472327720
Entrez 14998684
NCBI Locus Tag H681_22795

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP-dependent RNA helicase
Synonyms
Evidence for Translation
Charge (pH 7) 29.11
Kyte-Doolittle Hydrophobicity Value -0.873
Molecular Weight (kDa) 73615.5
Isoelectric Point (pI) 10.62

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 638 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000419 (542 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H681_22795

Human Homologs

Ensembl 97, assembly GRCh38.p12
DEAD-box helicase 27 [Source:HGNC Symbol;Acc:HGNC:15837]
E-value: 5.6e-63
Percent Identity: 43.1
Ensembl 97, assembly GRCh38.p12
DEAD-box helicase 27 [Source:HGNC Symbol;Acc:HGNC:15837]
E-value: 5.6e-63
Percent Identity: 43.1
Ensembl 97, assembly GRCh38.p12
DEAD-box helicase 27 [Source:HGNC Symbol;Acc:HGNC:15837]
E-value: 5.6e-63
Percent Identity: 43.1

References

No references are associated with this feature.