Pseudomonas aeruginosa LESB58, PALES_01371

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa LESB58
GCF_000026645.1|latest
Locus Tag
PALES_01371
Name
Replicon chromosome
Genomic location 153280 - 154851 (+ strand)

Cross-References

RefSeq YP_002437745
GI 218888881
Entrez 7175263

Product

Feature Type CDS
Coding Frame 1
Product Name
putative ATP-binding component of ABC transporter
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) 6.89
Kyte-Doolittle Hydrophobicity Value 0.109
Molecular Weight (kDa) 55779.9
Isoelectric Point (pI) 8.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000134 (908 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PALES_01371

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638]
E-value: 2.1e-16
Percent Identity: 29.8
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638]
E-value: 2.1e-16
Percent Identity: 29.8
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638]
E-value: 2.1e-16
Percent Identity: 29.8

References

No references are associated with this feature.