Pseudomonas aeruginosa LESB58, PALES_01631 (opdC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa LESB58
GCF_000026645.1|latest
Locus Tag
PALES_01631
Name
opdC
Replicon chromosome
Genomic location 183424 - 184758 (+ strand)

Cross-References

RefSeq YP_002437771
GI 218888907
Entrez 7175282

Product

Feature Type CDS
Coding Frame 1
Product Name
histidine porin OpdC
Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Charge (pH 7) -15.39
Kyte-Doolittle Hydrophobicity Value -0.482
Molecular Weight (kDa) 48.8
Isoelectric Point (pI) 4.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3SY9 MEMBRANE PROTEIN 07/16/11 Crystal structure of Pseudomonas aeruginosa OccD2 (OpdC) PSEUDOMONAS AERUGINOSA 2.8 X-RAY DIFFRACTION 99.5

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 23 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000160 (448 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PALES_01631
Search term: opdC

Human Homologs

References

No references are associated with this feature.