Pseudomonas aeruginosa LESB58, PALES_01701
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa LESB58
GCF_000026645.1|latest |
| Locus Tag |
PALES_01701
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 191795 - 192502 (- strand) |
Cross-References
| RefSeq | YP_002437778 |
| GI | 218888914 |
| Entrez | 7175288 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
putative GGDEF domain
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 4.91 |
| Kyte-Doolittle Hydrophobicity Value | -0.539 |
| Molecular Weight (kDa) | 26.8 |
| Isoelectric Point (pI) | 9.49 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 7E6G | DE NOVO PROTEIN | 02/22/21 | Crystal structure of diguanylate cyclase SiaD in complex with its activator SiaC from Pseudomonas aeruginosa | Pseudomonas aeruginosa | 2.65 | X-RAY DIFFRACTION | 95.7 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 454 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000167 (2758 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PALES_01701
Search term: putative GGDEF domain
|
Human Homologs
References
No references are associated with this feature.