Pseudomonas aeruginosa LESB58, PALES_26281
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa LESB58
GCF_000026645.1|latest |
| Locus Tag |
PALES_26281
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2824136 - 2827312 (+ strand) |
Cross-References
| RefSeq | YP_002440223 |
| GI | 218891356 |
| Entrez | 7177087 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -2.31 |
| Kyte-Doolittle Hydrophobicity Value | 0.342 |
| Molecular Weight (kDa) | 113.6 |
| Isoelectric Point (pI) | 6.61 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AMR gene predictions from CARD database
Identified using the Resistance Gene Identifier (RGI)
| Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
| adeF | AdeF is the membrane fusion protein of the multidrug efflux complex AdeFGH. [PMID:20696879] | ARO:3000777 | protein homolog model | Strict | 1224.9 | 61.11 | 3.2.5 |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 490 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG027982 (58 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PALES_26281
|
Human Homologs
References
No references are associated with this feature.