Pseudomonas aeruginosa LESB58, PALES_39881

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa LESB58
GCF_000026645.1|latest
Locus Tag
PALES_39881
Name
Replicon chromosome
Genomic location 4400303 - 4401919 (- strand)

Cross-References

RefSeq YP_002441571
GI 218892702
Entrez 7178129

Product

Feature Type CDS
Coding Frame 1
Product Name
putative ATP-binding component of ABC transporter
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) 1.09
Kyte-Doolittle Hydrophobicity Value -0.340
Molecular Weight (kDa) 59.1
Isoelectric Point (pI) 7.29

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 667 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001345 (417 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PALES_39881

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily F member 3 [Source:HGNC Symbol;Acc:HGNC:72]
E-value: 7.6e-30
Percent Identity: 28.5
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily F member 3 [Source:HGNC Symbol;Acc:HGNC:72]
E-value: 7.6e-30
Percent Identity: 28.5

References

No references are associated with this feature.